Biostatistics Decoded

Biostatistics Decoded
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Описание книги

Biostatistics Decoded  covered a large number of statistical methods that are mainly applied to clinical and epidemiological research, as well as a comprehensive discussion of study designs for observational research and clinical trials, two important concerns for the clinical researcher. In this second edition, new material is included covering statistical methods and study designs that are used to analyse research. Following the same methodology used in the first edition, the chapters are presented in two levels of detail, one for the reader who wishes only to understand the rationale behind each statistical method, and one for the reader who wishes to understand the computations Key features include: Extensive coverage of the design and analysis of experiments for basic science research Experimental designs are presented together with the statistical methods The rationale of all forms of ANOVA is explained with simple mathematics A comprehensive presentation of statistical tests for multiple comparisons Calculations for all statistical methods are illustrated with examples and explained step-by-step. This book presents biostatistical concepts and methods in a way that is accessible to anyone, regardless of his or her knowledge of mathematics. The topics selected for this book cover will meet the needs of clinical professionals to readers in basic science research.

Оглавление

A. Gouveia Oliveira. Biostatistics Decoded

Table of Contents

List of Illustrations

Guide

Pages

Biostatistics Decoded

Preface

1 Populations and Samples. 1.1 The Object of Biostatistics

1.2 Scales of Measurement

1.3 Central Tendency Measures

1.4 Sampling

1.5 Inferences from Samples

1.6 Measures of Location and Dispersion

1.7 The Standard Deviation

1.8 The n − 1 Divisor

1.9 Degrees of Freedom

1.10 Variance of Binary Variables

1.11 Properties of Means and Variances

1.12 Descriptive Statistics

1.13 Sampling Variation

1.14 The Normal Distribution

1.15 The Central Limit Theorem

1.16 Properties of the Normal Distribution

1.17 Probability Distribution of Sample Means

1.18 The Standard Error of the Mean

1.19 The Value of the Standard Error

1.20 Distribution of Sample Proportions

1.21 Convergence of Binomial to Normal Distribution

2 Descriptive Studies

2.1 Designing a Research

2.2 Study Design

2.3 Classification of Descriptive Studies

2.4 Cross‐sectional Studies

2.5 Inferences from Means

2.6 Confidence Intervals

2.7 Statistical Tables

2.8 The Case of Small Samples

2.9 Student's t Distribution

2.10 Statistical Tables of the t Distribution

2.11 Inferences from Proportions

2.12 Statistical Tables of the Binomial Distribution

2.13 Sample Size Requirements

2.14 Longitudinal Studies

2.15 Incidence Studies

2.16 Cohort Studies

2.17 Inference from Incidence Studies

2.18 Standardization

2.19 Time‐to‐Event Cohort Studies

2.20 The Actuarial Method

2.21 The Kaplan–Meier Method

2.22 Probability Sampling

2.23 Simple Random Sampling

2.24 Replacement in Sampling

2.25 Stratified Sampling

2.26 Multistage Sampling

3 Analytical Studies. 3.1 Objectives of Analytical Studies

3.2 Measures of Association

3.3 Odds, Logits, and Odds Ratios

3.4 Attributable Risk

3.5 Classification of Analytical Studies

3.6 Uncontrolled Analytical Studies

3.7 Comparative Analytical Studies

3.8 Hybrid Analytical Studies

3.9 Non‐probability Sampling in Analytical Studies

3.10 Comparison of Two Means

3.11 Comparison of Two Means from Small Samples

3.12 Comparison of Two Proportions

4 Statistical Tests. 4.1 The Null and Alternative Hypotheses

4.2 The z‐Test

4.3 The p‐Value

4.4 Student’s t‐Test

4.5 The Binomial Test

4.6 The Chi‐Square Test

4.7 The Table of the Chi‐Square Distribution

4.8 Analysis of Variance

4.9 Partitioning the Sum of Squares

4.10 Statistical Tables of the F Distribution

4.11 The ANOVA Table

5 Aspects of Statistical Tests. 5.1 One‐Sided Tests

5.2 Power of a Statistical Test

5.3 Sample Size Estimation

5.4 Multiple Comparisons

5.5 Scale Transformation

5.6 Non‐parametric Tests

6 Cross‐sectional Studies. 6.1 Linear Regression

6.2 The Least Squares Method

6.3 Linear Regression Estimates

6.4 Regression and Correlation

6.5 The F‐Test in Linear Regression

6.6 Interpretation of Regression Analysis Results

6.7 Multiple Regression

6.8 Regression Diagnostics

6.9 Selection of Predictor Variables

6.10 Independent Nominal Variables

6.11 Interaction

6.12 Nonlinear Regression

7 Case–Control Studies. 7.1 Analysis of Case–Control Studies

7.2 Logistic Regression

7.3 The Method of Maximum Likelihood

7.4 Estimation of the Logistic Regression Model

7.5 The Likelihood Ratio Test

7.6 Interpreting the Results of Logistic Regression

7.7 Regression Coefficients and Odds Ratios

7.8 Applications of Logistic Regression

7.9 The ROC Curve

7.10 Model Validation

8 Cohort Studies. 8.1 Repeated Measurements

8.2 The Paired t‐Test

8.3 McNemar’s Test

8.4 Generalized Linear Models

8.5 The Logrank Test

8.6 The Adjusted Logrank Test

8.7 The Incidence Rate Ratio

8.8 The Cox Proportional Hazards Model

8.9 Assumptions of the Cox Model

8.10 Interpretation of Cox Regression

9 Measurement. 9.1 Construction of Clinical Questionnaires

9.2 Factor Analysis

9.3 Interpretation of Factor Analysis

9.4 Factor Rotation

9.5 Factor Scores

9.6 Reliability

9.7 Concordance

9.8 Validity

9.9 Validation of Diagnostic Tests

10 Experimental Studies

10.1 Main Design Features and Classification

10.2 Experimental Controls

10.3 Replicates

10.4 Classification of Experimental Designs

10.5 Completely Randomized Design

10.6 Interaction

10.7 Full Factorial Design

10.8 The Random Effects Model

10.9 Components of Variance

10.10 ANOVA Model II and Model III

10.11 Rules for the Definition of the Error Terms

10.12 ANOVA on Ranks

11 Blocking. 11.1 Randomized Block Design

11.2 Generalized Randomized Block Design

11.3 Incomplete Block Design

11.4 Factorial Design with Randomized Blocks

11.5 Latin and Greco‐Latin Square Design

12 Simultaneous Inference. 12.1 Multiple Comparisons

12.2 Generalist Methods

12.3 Multiple Comparisons of Group Means

12.4 Pairwise Comparison of Means

12.5 Different Variances

12.6 Comparison to a Control

12.7 Comparison of post hoc Tests

12.8 Complex Comparisons

12.9 Tests of Multiple Contrasts

12.10 A posteriori Contrasts

12.11 The Size of an Experiment

13 Factorial ANOVA. 13.1 The n‐Way ANOVA

13.2 The 2k Factorial Design

13.3 The 2k Factorial Design with Blocking

13.4 The Fractional Factorial Design

14 Nested Designs. 14.1 Split–Plot Design

14.2 Nested (Hierarchical) Design

14.3 Mixed Model Nested ANOVA

14.4 Mixed Model Nested ANOVA with Three Sublevels

14.5 Pure Model II Nested ANOVA

15 Repeated Measures

15.1 Repeated Measures ANOVA

15.2 Repeated Measures ANOVA with Two Factors

15.3 ANOVA with Several Repeated Measures

15.4 Multivariate Tests

16 Clinical Trials. 16.1 Classification of Clinical Trials

16.2 The Clinical Trial Population

16.3 The Efficacy Criteria

16.4 Controlled Clinical Trials

16.5 The Control Group

16.6 Blinding

16.7 Randomization

16.8 Non‐comparative Clinical Trials

16.9 Regression Toward the Mean

16.10 Non‐randomized Controlled Clinical Trials

16.11 Classical Randomized Clinical Trial Designs

16.12 Alternative Clinical Trial Designs

16.13 Pragmatic Clinical Trials

16.14 Cluster Randomized Trials

16.15 The Size of a Clinical Trial

16.16 Non‐inferiority Clinical Trials

16.17 Adaptive Clinical Trials

16.18 Group Sequential Plans

16.19 The Alpha Spending Function

16.20 The Clinical Trial Protocol

16.21 The Data Record

17 Analysis of Clinical Trials. 17.1 General Analysis Plan

17.2 Data Preparation

17.3 Study Populations

17.4 Primary Efficacy Analysis

17.5 Analysis of Multiple Endpoints

17.6 Secondary Analyses

17.7 Safety Analysis

18 Meta‐analysis. 18.1 Purpose of Meta‐analysis

18.2 Measures of Effect

18.3 The Inverse Variance Method

18.4 The Random Effects Model

18.5 Heterogeneity

18.6 Publication Bias

18.7 The Forest Plot

References

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Отрывок из книги

Second Edition

A. Gouveia Oliveira

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Figure 1.15 Two random variables with uniform distribution.

Figure 1.16 Properties of means and variances.

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