Organofluorine Chemistry

Organofluorine Chemistry
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By presenting novel methods for the efficient preparation of fluorinated compounds and their application in pharmaceutical and agrochemical chemistry as well as medicine, this is a valuable source of information for all researchers in academia and industry!

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Группа авторов. Organofluorine Chemistry

Table of Contents

Pages

Organofluorine Chemistry. Synthesis, Modeling, and Applications

Preface

1 The Development of New Reagents and Reactions for Synthetic Organofluorine Chemistry by Understanding the Unique Fluorine Effects

1.1 Introduction

1.2 The Unique Fluorine Effects in Organic Reactions

1.2.1 Fluorine‐Enabled Stability of “CuCF3” in Water, and the Unusual Water‐Promoted Trifluoromethylation

1.2.2 Fluorine Enables β‐Fluoride Elimination of Organocopper Species

1.2.3 The “Negative Fluorine Effect” Facilitates the α‐Elimination of Fluorocarbanions to Generate Difluorocarbene Species

1.2.4 Tackling the β‐Fluoride Elimination of Trifluoromethoxide Anion via a Fluoride Ion‐Mediated Process

1.3 The Relationships Among Fluoroalkylation, Fluoroolefination, and Fluorination

1.3.1 From Fluoroalkylation to Fluoroolefination

1.3.2 From Fluoroolefination to Fluoroalkylation

1.3.3 From Fluoroalkylation to Fluorination

1.4 Conclusions

References

2 Perfluoroalkylation Using Perfluorocarboxylic Acids and Anhydrides

2.1 Introduction

2.2 Perfluoroalkylation with Perfluorocarboxylic Acids

2.2.1 Electrochemical Reactions

2.2.1.1 Reactions of Alkenes and Alkynes

2.2.1.2 Reaction of Aromatic Compounds

2.2.2 Reactions Using XeF2

2.2.3 Reactions Using Copper and Silver Salts

2.2.3.1 Using Copper Salts

2.2.3.2 Using Silver Salts

2.2.4 Photochemical Reactions

2.2.5 Other Methods. 2.2.5.1 Hydro‐Trifluoromethylation of Fullerene

2.2.5.2 Metal‐Free Aryldifluoromethylation Using S2O82−

2.3 Perfluoroalkylation with Perfluorocarboxylic Anhydride

2.3.1 Reactions Using Perfluorocarboxylic Anhydride/Urea·H2O2

2.3.2 Photocatalytic Reactions Using Perfluorocarboxylic Anhydride/Pyridine N‐oxide

2.4 Summary and Prospects

References

3 Chemistry of OCF3, SCF3, and SeCF3 Functional Groups

3.1 Introduction

3.2 CF3O Chemistry

3.2.1 De Novo Construction. 3.2.1.1 Trifluorination of Alcohol Derivatives

3.2.1.2 Fluorination of Difluorinated Compounds

3.2.2 Indirect Methods

3.2.2.1 O‐(Trifluoromethyl)dibenzofuranium Salts

3.2.2.2 Hypervalent Iodine Trifluoromethylation Reagents

3.2.2.3 CF3SiMe3

3.2.3 Direct Trifluoromethoxylation

3.2.3.1 Difluorophosgene and Derivatives

3.2.3.2 Trifluoromethyl Hypofluorite and Derivatives

3.2.3.3 Trifluoromethyl Triflate (TFMT)

3.2.3.4 Trifluoromethoxide Salts Derived from TFMT or Difluorophosgene

3.2.3.5 Trifluoromethyl Arylsulfonates (TFMSs)

3.2.3.6 Trifluoromethylbenzoate (TFBz)

3.2.3.7 2,4‐Dinitro(trifluoromethoxy)benzene (DNTFB)

3.2.3.8 (Triphenylphosphonio)difluoroacetate (PDFA)

3.2.3.9 N‐Trifluoromethoxylated Reagents

3.3 CF3S Chemistry

3.3.1 Indirect Methods

3.3.2 Direct Trifluoromethylthiolation

3.3.2.1 CF3SAg, CF3SCu, CF3SNR4

3.3.2.2 Trifluoromethanesulfenamides

3.3.2.3 N‐Trifluoromethylthiophthalimide

3.3.2.4 N‐Trifluoromethylthiosaccharin

3.3.2.5 N‐Trifluoromethylthiobis(phenylsulfonyl)amide

3.4 CF3Se Chemistry. 3.4.1 Introduction

3.4.2 Indirect Synthesis of CF3Se Moiety

3.4.2.1 Ruppert–Prakash Reagent (CF3SiMe3)

3.4.2.2 Fluoroform (HCF3)

3.4.2.3 Other Reagents Involved in CF3− Anion Generation

3.4.2.4 Sodium Trifluoromethylsulfinate (CF3SO2Na)

3.4.3 Direct Introduction of the CF3Se Moiety

3.4.3.1 Trifluoromethyl Selenocopper DMF Complex

3.4.3.2 Trifluoromethyl Selenocopper Bipyridine Complex: [bpyCuSeCF3]2

3.4.3.2.1 C(sp3)—Se Bond Formation

3.4.3.2.2 C(sp2)—Se Bond Formation

3.4.3.2.3 C(sp)—Se Bond Formation

3.4.3.3 Tetramethylammonium Trifluoromethylselenolate [(NMe4)(SeCF3)]

3.4.3.4 In Situ Generation of CF3Se− Anion from Elemental Selenium

3.4.3.5 Trifluoromethylselenyl Chloride (CF3SeCl)

3.4.3.6 Benzyltrifluoromethylselenide (CF3SeBn)

3.4.3.7 Trifluoromethylselenotoluenesulfonate (CF3SeTs)

3.4.3.7.1 CF3SeTs as Electrophilic Reagent

3.4.3.7.2 CF3SeTs as Nucleophilic Reagent

3.4.3.7.3 CF3SeTs in Radical Trifluoromethylselenolation

3.4.3.8 Benzylthiazolium Salt BT‐SeCF3

3.5 Summary and Conclusions

References

4 Introduction of Trifluoromethylthio Group into Organic Molecules

4.1 Introduction

4.2 Nucleophilic Trifluoromethylthiolation. 4.2.1 Preparation of Nucleophilic Trifluoromethylthiolating Reagent. 4.2.1.1 Preparation of Hg(SCF3)2, AgSCF3, and CuSCF3

4.2.1.2 Preparation of MSCF3 (M = K, Cs, Me4N, and S(NMe2)3)

4.2.1.3 Preparation of Stable Trifluoromethylthiolated Copper(I) Complexes

4.2.2 Formation of C(sp2)‐SCF3 by Nucleophilic Trifluoromethylthiolating Reagents. 4.2.2.1 Reaction of CuSCF3 with Aryl Halides

4.2.2.2 Sandmeyer‐Type Trifluoromethylthiolation

4.2.2.3 Transition Metal‐Catalyzed Trifluoromethylthiolation

4.2.2.4 Oxidative Trifluoromethylthiolation

4.2.2.5 Transition Metal‐Catalyzed Trifluoromethylthiolation of Arenes via C–H Activation

4.2.2.6 Miscellaneous Methods for the Formation or Aryl Trifluoromethylthioethers via Nucleophilic Trifluoromethylthiolating Reagents

4.2.3 Formation of C(sp3)‐SCF3 by Nucleophilic Trifluoromethylthiolating Reagents. 4.2.3.1 Reaction of CuSCF3 with Activated Alkylated Halides

4.2.3.2 Reaction of MSCF3 with Unactivated Alkyl Halides

4.2.3.3 Nucleophilic Dehydroxytrifluoromethylthiolation of Alcohols

4.2.3.4 Nucleophilic Trifluoromethylthiolation of Alcohol Derivatives

4.2.3.5 Nucleophilic Trifluoromethylthiolation of α‐Diazoesters

4.2.3.6 Formation or Alkyl Trifluoromethylthioethers via In Situ Generated Nucleophilic Trifluoromethylthiolating Reagent

4.2.3.7 Formation of Alkyl Trifluoromethylthioethers via C—H Bond Trifluoromethylthiolation

4.3 Electrophilic Trifluoromethylthiolating Reagents

4.3.1 CF3SCl

4.3.2 CF3SSCF3

4.3.3 Haas Reagent

4.3.4 Munavalli Reagent

4.3.5 Billard Reagent

4.3.6 Shen Reagent

4.3.7 Shen Reagent‐II

4.3.8 Optically Active Pure Trifluoromethylthiolation Reagents

4.3.9 Lu–Shen Reagent

4.3.10 α‐Cumyl Bromodifluoromethanesulfenate

4.3.11 Shibata Reagent

4.3.12 In Situ‐Generated Electrophilic Trifluoromethylthiolating Reagents

4.3.12.1 AgSCF3 + TCCA

4.3.12.2 AgSCF3 + NCS

4.3.12.3 Langlois Reagent (CF3SO2Na) with Phosphorus Reductants

4.3.12.4 Use of CF3SO2Cl with Phosphorus Reductants

4.3.12.5 Reagent Based on CF3SOCl and Phosphorus Reductants

4.4 Radical Trifluoromethylthiolation

4.4.1 Trifluoromethylthiolation by AgSCF3/S2O82−

4.4.2 Electrophilic Reagents Involved in Radical Trifluoromethylthiolation

4.4.3 Visible Light‐Promoted Trifluoromethylthiolation by Using Electrophilic Reagents

4.5 Summary and Prospect

References

5 Bifunctionalization‐Based Catalytic Fluorination and Trifluoromethylation

5.1 Introduction

5.2 Palladium‐Catalyzed Fluorination, Trifluoromethylation, and Trifluoromethoxylation of Alkenes

5.2.1 Palladium‐Catalyzed Fluorination of Alkenes

5.2.2 Palladium‐Catalyzed Trifluoromethylation of Alkenes

5.2.3 Palladium‐Catalyzed Trifluoromethoxylation of Alkenes

5.3 Copper‐Catalyzed Trifluoromethylative Functionalization of Alkenes

5.3.1 Copper‐Catalyzed Trifluoromethylamination of Alkenes

5.3.2 Copper‐Catalyzed Trifluoromethyloxygenation of Alkenes

5.3.3 Copper‐Catalyzed Trifluoromethylcarbonation of Alkenes

5.3.4 Enantioselective Copper‐Catalyzed Trifluoromethylation of Alkenes

5.4 Summary and Conclusions

References

6 Fluorination, Trifluoromethylation, and Trifluoromethylthiolation of Alkenes, Cyclopropanes, and Diazo Compounds

6.1 Introduction

6.2 Fluorination of Alkenes, Cyclopropanes, and Diazocarbonyl Compounds

6.2.1 Application of Fluoro‐Benziodoxole for Fluorination of Alkenes

6.2.1.1 Geminal Difluorination of Styrene Derivatives

6.2.1.2 Iodofluorination of Alkenes

6.2.1.3 Fluorocyclization with C—N, C—O, and C—C Bond Formation

6.2.2 Fluorinative Cyclopropane Opening

6.2.3 Fluorine‐18 Labeling with Fluorobenziodoxole

6.3 Fluorination‐Based Bifunctionalization of Diazocarbonyl Compounds

6.3.1 Rhodium‐Catalyzed Geminal Oxyfluorination Reactions

6.3.2 [18F]Fluorobenziodoxole for Synthesis of α‐Fluoro Ethers

6.4 Trifluoromethylation of Alkenes, Alkynes, and Diazocarbonyl Compounds with the Togni Reagent

6.4.1 Bifunctionalization of C—C Multiple Bonds

6.4.1.1 Oxytrifluoromethylation of Alkenes and Alkynes

6.4.1.2 Cyanotrifluoromethylation of Styrenes

6.4.1.3 C–H Trifluoromethylation of Benzoquinone Derivatives

6.4.2 Geminal Oxytrifluoromethylation of Diazocarbonyl Compounds

6.5 Bifunctionalization‐Based Trifluoromethylthiolation of Diazocarbonyl Compounds

6.5.1 Multicomponent Approach for Geminal Oxy‐Trifluormethylthiolation

6.5.2 Simultaneous Formation of C—C and C—SCF3 Bonds via Hooz‐Type Reaction

6.6 Summary

References

7 Photoredox Catalysis in Fluorination and Trifluoromethylation Reactions

7.1 Introduction

7.2 Fluorination

7.2.1 Fluorination Through Direct HAT Process by Excited Photocatalyst

7.2.2 Fluorination Through Photoredox Processes

7.3 Trifluoromethylation

7.3.1 Trifluoromethylation of Aromatic Compounds

7.3.2 Trifluoromethylative Substitution of Alkyl Bromides

7.4 Summary and Outlook

References

8 Asymmetric Fluorination Reactions

8.1 Introduction

8.2 Electrophilic Fluorination

8.2.1 Stoichiometric Asymmetric Fluorination. 8.2.1.1 Chiral Auxiliary

8.2.1.2 Chiral Reagents

8.2.2 Catalytic Electrophilic Fluorination. 8.2.2.1 Organocatalytic Fluorination

8.2.2.1.1 Tertiary Amine Catalysis

8.2.2.1.2 Chiral Cation Phase Transfer

8.2.2.1.3 Enamine Catalysis

8.2.2.1.4 Chiral Lewis Base Catalysis

8.2.2.1.5 Chiral Anion Phase Transfer

8.2.2.2 Transition Metal‐Catalyzed Fluorinations

8.2.2.2.1 Fluorination of Metal Enolates or Equivalent

Ti–Taddol Complexes

BINAP‐ and SEGPHOS‐Based Ligands

Oxazoline‐Based Ligands

Miscellaneous Metal‐Catalyzed Reactions

8.2.2.2.2 Fluorination of Metal–Carbon Bonds Without Enolates

8.3 Nucleophilic Fluorination

8.3.1 Metal‐Catalyzed Nucleophilic Fluorination. 8.3.1.1 Ring Opening of Strained Ring Systems

8.3.1.2 Allylic Functionalization

8.3.2 Organocatalytic Nucleophilic Fluorination

8.4 Summary and Conclusions

References

9 The Self‐Disproportionation of Enantiomers (SDE): Fluorine as an SDE‐Phoric Substituent

9.1 Introduction

9.2 General Concepts and the Role of Fluorine in the Manifestation of the SDE

9.3 The SDE Phenomenon. 9.3.1 SDE via Distillation

9.3.2 SDE via Sublimation

9.3.3 SDE via Chromatography

9.3.3.1 SDEvC for Compounds Containing a –CF3 Moiety

9.3.3.2 SDEvC for Compounds Containing a Cq–F1/2 Moiety

9.3.3.3 SDEvC for Compounds Containing a –COCF3 Moiety

9.4 The SIDA Phenomenon

9.5 Conclusions and Recommendations

References

10 DFT Modeling of Catalytic Fluorination Reactions: Mechanisms, Reactivities, and Selectivities

10.1 Introduction

10.2 DFT Modeling of Transition Metal‐Catalyzed Fluorination Reactions. 10.2.1 Ti‐Catalyzed Fluorination Reaction

10.2.2 Mn‐Catalyzed Fluorination Reactions

10.2.3 Fe‐Catalyzed Fluorination Reactions

10.2.4 Rh‐Catalyzed Fluorination Reactions

10.2.5 Ir‐Catalyzed Fluorination Reactions

10.2.6 Pd‐Catalyzed Fluorination Reactions. 10.2.6.1 Pd‐Catalyzed Nucleophilic Fluorination

10.2.6.2 Pd‐Catalyzed Electrophilic Fluorination

10.2.7 Cu‐Catalyzed Fluorination Reactions. 10.2.7.1 Cu‐Catalyzed Nucleophilic Fluorination

10.2.7.2 Cu‐Mediated Radical Fluorination

10.2.8 Ag‐Catalyzed Fluorination Reactions

10.2.9 Zn‐Catalyzed Fluorination Reactions

10.3 DFT Modeling of Organocatalytic Fluorination Reactions. 10.3.1 Fluorination Reactions Catalyzed by Chiral Amines. 10.3.1.1 Chiral Secondary Amines‐Catalyzed Fluorination Reactions

10.3.1.2 Chiral Primary Amines‐Catalyzed Fluorination Reactions

10.3.2 Tridentate Bis‐Urea Catalyzed Fluorination Reactions

10.3.3 Hypervalent Iodine‐Catalyzed Fluorination Reactions

10.3.4 N‐Heterocyclic Carbene‐Catalyzed Fluorination Reactions

10.4 DFT Modeling of Enzymatic Fluorination Reaction

10.5 Conclusions

Acknowledgments

References

11 Current Trends in the Design of Fluorine‐Containing Agrochemicals

11.1 Introduction

11.2 Role of Fluorine in the Design of Modern Agrochemicals

11.3 Fluorinated Modern Agrochemicals

11.3.1 Herbicides Containing Fluorine. 11.3.1.1 Acetohydroxyacid Synthase/Acetolactate Synthase Inhibitors

11.3.1.2 Protoporphyrinogen Oxidase Inhibitors

11.3.1.3 Cellulose Biosynthesis Inhibitors

11.3.1.4 Very Long‐Chain Fatty Acid Synthesis Inhibitors

11.3.1.5 Auxin Herbicides

11.3.1.6 Hydroxyphenylpyruvate Dioxygenase Inhibitors

11.3.1.7 Selected Fluorine‐Containing Herbicide Development Candidates

11.3.2 Fungicides Containing Fluorine. 11.3.2.1 Fungicidal Succinate Dehydrogenase Inhibitors

11.3.2.2 Complex III Inhibitors

11.3.2.3 Sterolbiosynthesis (Sterol‐C14‐Demethylase) Inhibitors

11.3.2.4 Polyketide Synthase Inhibitors

11.3.2.5 Oxysterol‐Binding Protein Inhibitors

11.3.2.6 Selected Fluorine‐Containing Fungicide Development Candidates

11.3.3 Insecticides Containing Fluorine. 11.3.3.1 Nicotinic Acetylcholine Receptor Competitive Modulators

11.3.3.1.1 Sulfoximines

11.3.3.1.2 Butenolides

11.3.3.1.3 Mesoionics

11.3.3.2 Ryanodine Receptor (RyR) Modulators

11.3.3.3 GABA‐Gated CI‐Channel Allosteric Modulators

11.3.3.4 Selected Fluorine‐Containing Insecticide Development Candidates

11.3.4 Acaricides Containing Fluorine. 11.3.4.1 Mitochondrial Complex II Electron Transport Inhibitors

11.3.4.2 Selected Fluorine‐Containing Acaricide Development Candidates

11.3.5 Nematicides Containing Fluorine. 11.3.5.1 Nematicides with Unknown Biochemical MoA

11.3.5.2 Nematicidal Succinate Dehydrogenase Inhibitors

11.3.5.3 Selected Fluorine‐Containing Nematicide Development Candidates

11.4 Summary and Prospects

References

12 Precision Radiochemistry for Fluorine‐18 Labeling of PET Tracers

12.1 Introduction

12.2 Electrophilic 18F‐Fluorination with [18F]F2 and [18F]F2‐Derived Reagents

12.3 Nucleophilic Aliphatic 18F‐Fluorination. 12.3.1 Transition Metal‐Free Nucleophilic Aliphatic Substitution with [18F]Fluoride

12.3.2 Transition Metal‐Mediated Aliphatic 18F‐Fluorination

12.4 Nucleophilic Aromatic 18F‐Fluorination with [18F]Fluoride. 12.4.1 Transition Metal‐Free Nucleophilic Aromatic 18F‐Fluorination with [18F]Fluoride

12.4.2 Transition Metal‐Mediated Aromatic 18F‐Fluorination

12.5 18F‐Labeling of Multifluoromethyl Motifs with [18F]Fluoride

12.6 Summary and Conclusions

References

Index

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Edited by Kálmán J. Szabó and Nicklas Selander

As mentioned above, all useful organofluorine compounds are human made. Therefore, there is an enormous pressure on synthetic organic chemists to produce a wide variety of new fluorinated compounds. This book is intended to cover the most important state‐of‐the‐art synthetic methods and addresses current challenges within the field. At the same time, it gives in‐depth analysis of the underlying chemical processes controlling the formation of new bonds between carbon and fluorine or fluorinated functional groups. A further important aspect is the application of organofluorine compounds in various areas of medicinal and agrochemistry.

.....

Except for 2‐PySO2CF2H, many other fluorinated heteroaryl sulfones have been extensively investigated. As we can see from Scheme 1.11c, although BTSO2CF2H was found to be an inefficient fluoroolefination reagent, its use for radical fluoroalkylation is a great success. In 2015, we developed a novel method for the preparation of sodium fluoroalkanesulfinates by the reduction of the corresponding benzo[d]thiazol‐2‐yl sulfones (BTSO2Rf) [9]. This method enables a highly efficient and rapid large‐scale synthesis of sodium di‐ and monofluoromethanesulfinates (Scheme 1.18a). Synthetic application of these sulfinates in radical fluoroalkylation is exemplified by the silver‐catalyzed cascade fluoroalkylation/aryl migration/SO2 extrusion of conjugated N‐arylsulfonylated amides (Scheme 1.18b).

The versatility of heteroaryl sulfones as fluoroalkyl radical precursors may be best illustrated by the readily tunable reactivity of heteroaryl sulfones that can generate a wide range of fluoroalkyl radicals such as monofluoromethyl, difluoromethyl, 1, 1‐difluoroethyl, phenyldifluoromethyl, benzoyldifluoromethyl, and trifluoromethyl radicals via visible light photoredox catalysis under mild conditions [7d]. The synthetic application of heteroaryl sulfones in radical fluoroalkylation of isocyanides was demonstrated to highlight the versatility of heteroaryl sulfones as fluoroalkyl radical precursors (Scheme 1.19a). The most prominent feature using heteroaryl sulfones as fluoroalkyl radical precursors is that they are reactivity‐tunable. By slightly changing the heteroaryl rings, the redox potential of fluorinated heteroaryl sulfones can be varied, ensuring the efficient generation of various fluoroalkyl radicals (Scheme 1.19b).

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