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Internet Resources

UCSC Genome Browser
Main page	genome.ucsc.edu
Genome Browser User's Guide	genome.ucsc.edu/goldenPath/help/hgTracksHelp.html
Table Browser User's Guide	genome.ucsc.edu/goldenPath/help/hgTablesHelp.html
Displaying custom annotation data	genome.ucsc.edu/goldenPath/help/customTrack.html
Data file formats for custom annotation	genome.ucsc.edu/FAQ/FAQformat.html
Sessions User's Guide	genome.ucsc.edu/goldenPath/help/hgSessionHelp.html
Using UCSC Genome Browser Track Hubs	genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html
Assembly Hubs wiki	genomewiki.ucsc.edu/index.php/Assembly_Hubs
Contact information	genome.ucsc.edu/contacts.html
Ensembl Genome Browser
Main page	www.ensembl.org
Ensembl Stable IDs	www.ensembl.org/info/genome/stable_ids
Ensembl Archives	www.ensembl.org/info/website/archives
BioMart	www.ensembl.org/biomart/martview
pre!Ensembl	pre.ensembl.org
Help & Documentation	www.ensembl.org/info
BioMart documentation	www.ensembl.org/info/data/biomart
Displaying custom annotation data	www.ensembl.org/info/website/upload
Data file formats for custom annotation	www.ensembl.org/info/website/upload/index.html#formats
Contact information	www.ensembl.org/info/about/contact
JBrowse
JBrowse Genome Browser	jbrowse.org
COSMIC Genome Browser	cancer.sanger.ac.uk/cosmic/browse/genome
Mnemiopsis Genome Project Portal (MGAP)	research.nhgri.nih.gov/mnemiopsis
Phytozome	phytozome.jgi.doe.gov
Rat Genome Database	rgd.mcw.edu
Other genome resources
GENCODE	www.gencodegenes.org
Genome Reference Consortium	www.ncbi.nlm.nih.gov/grc
GWAS Catalog	www.ebi.ac.uk/gwas
National Center for Biotechnology Information (NCBI) Genome Data Viewer	www.ncbi.nlm.nih.gov/genome/gdv
National Institutes of Health (NIH) Genomic Data Sharing Policyies	osp.od.nih.gov/scientific-sharing/policies
NIH Genotype-Tissue Expression (GTEx) Portal	www.gtexportal.org
Track Hub Registry	www.trackhubregistry.org

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