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1 Chapter 1Table 1.1 Effects of dietary protein on host‐gut microbiota.Table 1.2 Effects of natural and artificial sugar on gut microbiota.Table 1.3 Effect of non‐digestible carbohydrates on gut microbiota.Table 1.4 Effect of dietary fat on gut microbiota.Table 1.5 Infrastructures supporting microbiome research.

2 Chapter 2Table 2.1 Examples of gut microbiome and metabolites associated with psychi...Table 2.2 Preclinical studies for different diseases with the probiotics us...Table 2.3 Clinical studies for different diseases with the probiotics used ...

3 Chapter 3Table 3.1 Microbial diagnostics for the detection of disease states.

4 Chapter 5Table 5.1 Summary of the popular tools for analyzing ‐omics data.

5 Chapter 6Table 6.1 Recent examples of engineered biosensing probiotics.

6 Chapter 8Table 8.1 A list of FMT donor‐screening studies.

7 Chapter 9Table 9.1 Gut microbiota during pregnancy.Table 9.2 Factors that influence the breast milk microbiota.

8 Chapter 10Table 10.1 Transcription factor (TF)‐based biosensors for microbiome applic...

Principles in Microbiome Engineering

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