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4.3.2 Considerations for Practice of in vivo CRISPR Screening

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There are practical considerations to bear in mind with regard to reagents and materials for the design and execution of in vivo CRISPR screens. Due to the limited number of cells that can be injected into each animal, it is challenging to perform genome‐wide In vivo screens with appropriate library coverage. Therefore, most researchers have chosen to use a focused mini‐pool gRNA library to ensure high screen quality. While off‐the‐shelf sub‐pool gRNA libraries are available from major commercial vendors, custom‐designed gRNA libraries can be constructed by CROs like Merck, Horizon Discovery, and GenScript. To make your own gRNA libraries, Twist Bioscience, CustomArray (now part of GenScript), Agilent, and IDT are the major suppliers for oligonucleotide library synthesis. It is easier to conduct pooled in vivo CRISPR screens using cells from transgenic mice constitutively expressing Cas9, as this bypasses the need for endonuclease delivery/selection into target cells. Several different Cas9 knock‐in mice are available from The Jackson Laboratory, but licenses for research use must be obtained from the original inventors for industry/biotech institutions. T cell receptor transgenic mice from The Jackson Laboratory and other suppliers are commonly used for adoptive T cell transfer experiments, which allow for T‐cell‐based in vivo CRISPR screening. Major CROs that offer in vivo genetic screens are included in Table 4.2.

Table 4.2 Genome editing service providers.

Company Location Technologies Services
Applied Stem Cell Milpitas, CA CRISPR/Cas9 Cell engineering: cell lines, ES/iPSCs
ATCC Manassas, VA CRISPR/Cas9 Cell engineering: cell lines
BioGene Shirley, NY CRISPR/Cas9 Cell engineering: cell lines, iPSCs, primary cells; rodent models; plants models
Canopy Biosciences St. Louis, MO CRISPR/Cas9 Cell engineering: cell lines, ES/iPSCs
Cellecta Mountain View, CA CRISPR/Cas9 genetic screening
Cellular Dynamics International Madison Wisconsin CRISPR/Cas9 ES/iPSC engineering
Charles River Laboratories Wilmington, MA CRISPR/Cas9 Cell engineering; rodent models
Crown Bioscience Santa Clara, CA CRISPR/Cas9 Rodent models
DefiniGEN Cambridge, UK CRISPR/Cas9 iPSC engineering
Evotec Hamburg, Germany CRISPR/Cas9 In vitro genetic screening
genOway Lyon, France CRISPR/Cas9 Cell engineering: cell lines, rodent models
GenScript Jiangning, China CRISPR/Cas9 Bacterial engineering; cell line engineering
Horizon Discovery Cambridge, United Kingdom CRISPR/Cas9 Cell engineering: cell lines, ES/iPSCs; in vitro and in vivo genetic screening
Merck KGaA Darmstadt, Germany CRISPR/Cas9, ZFN Cell engineering: cell lines, iPSCs, primary cells
Oxgene Oxford, United Kingdom CRISPR/Cas9 Cell line engineering
Synthego Redwood City, CA CRISPR/Cas9 Cell engineering: cell lines, iPSCs, primary cells; in vitro genetic screening
System Biosciences Palo Alto, CA CRISPR/Cas9 Cell line engineering
ThermoFisher Carlsbad, CA CRISPR/Cas9, TALEN Cell line engineering
Ubigene Guangzhou Science City, China CRISPR/Cas9 Bacterial engineering, fungal engineering, cell line engineering
WuXi AppTec Shanghai, China CRISPR/Cas9 Rodent models; in vitro genetic screening
Genome Editing in Drug Discovery

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